![]() Introduction of the CLC Genomics Workbench tools will take place from 10:30 to 12:15, at Genopolys, room « Open » (2 nd floor). Specific analyses, the workshop session will be from 9:00 to 10:30, at Genopolys, room « Open ». The presentation of this software will be given by Elodie Dubus, a Qiagen software specialist, and for those who have already started to work with this software and want to go deeper in the comprehension of this tool and their databases there will be a workshop dedicated to what you want to do. Together, these results provide the earliest evidence for the use of livestock in the mountains of the Ferghana Valley, predating previous evidence by 3,000 years and suggesting that domestic animal economies reached the mountains of interior Central Asia far earlier than previously recognized.Workshop days: CLC Genomics Workbench from QIAGENįor those who need to do analyses of DNA-seq (including de novo assembly), RNA-seq, ChIP seq (these are just examples), and who would be interested in a software to help you in these kinds of analyses (with intuitive tools, guides and tutorials), there will be a presentation of CLC Genomics Workbench from QIAGEN. aries, within the genetic diversity of domesticated sheep lineages. Most significantly, ancient DNA reveals these directly dated specimens as the domestic O. Zooarchaeological and collagen peptide mass fingerprinting show exploitation of Ovis and Capra, while cementum analysis of intact teeth implicates possible pastoral slaughter during the fall season. Here, we present archaeological and biomolecular evidence from Obishir V in southern Kyrgyzstan, establishing the presence of domesticated sheep by ca. CLC Genomics Workbench offers a range of accurate variant detectors to detect single nucleotide variants (SNVs), multi-nucleotide variants (MNVs), small-to medium-sized insertions, deletions or replacements, as well as copy number variants (CNVs) and other large structural variants. bwa denotes BWA+SAMtools, clc denotes CLC Genomics Workbench, giga denotes. The development and dispersal of agropastoralism transformed the cultural and ecological landscapes of the Old World, but little is known about when or how this process first impacted Central Asia. The lower minimum allele percentage of heterozygous calls in the IBD region by both the Mosaik+GigaBayes and CLC pipelines, indicates that even a few false alignments can introduce higher false positive rates (FPRs) compared to the FPRs using the BWA and SMALT pipelines. With slightly decreased genetic diversity, the local sheep, including the Kihnu native sheep, have been preserved up to the present. Secondly, changes came along with the beginning of the large-scale breeding in the 19th century, aimed to improve the local production of mutton and wool. Moreover, the growth of the populations seems to have relied on local herds, while the effect of imported animals was probably insignificant. Genetically it is expressed in population expansion, possibly linked to the overall increase in human population and the demand for meat supplies. ![]() ![]() Firstly, the transition from prehistory to the Middle Ages, including the 13th century Crusades. Nonetheless, changes occurred, which could mainly be related to two distinct periods. The results of the study indicate that, starting from the Bronze Age, sheep husbandry and utilisation in Estonia has been rather persistent. The genetic part of the research aims to analyse the maternally inherited mitochondrial DNA both in the ancient populations and modern Kihnu native sheep. The zooarchaeological part of the thesis focuses on animal consumption in Late Iron Age and medieval Viljandi and Karksi, and tackles the changes in proportion and exploitation of faunal resources over time. By using zooarchaeological and genetic data, the aim of the dissertation is to study sheep husbandry and the development of maternal lineages in Estonia and more widely, in the Baltic Sea region, from the Middle Bronze Age (c. Introduction of the CLC Genomics Workbench tools will take place from 10:30 to 12:15, at Genopolys, room Open (2 nd floor). Today, sheep husbandry forms a small, but important part in Estonian agriculture. Sheep (Ovis aries) has been one of the most exploited domestic animal in Estonia since the Late Bronze Age.
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |